BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D01LP1|AL429885
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig379 1396 0.0
>3x_Contig379
Length = 1842
Score = 1396 bits (694), Expect = 0.0
Identities = 846/887 (95%), Gaps = 18/887 (2%)
Strand = Plus / Plus
Query: 1 gatyacacttttcaccctagaagtgaatccacccagccatctatagtacggagtagttga 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 650 gatcacacttttcaccctagaagtgaatccacccagccatctatagtacggagtagt-ga 708
Query: 61 atttgctttaygtytatagtcttttygctccaggagaaayycttaggtactactcccaag 120
|||||||||| || ||||||||||| ||||||||||||| |||||| || |||||||||
Sbjct: 709 atttgctttacgtctatagtcttttcgctccaggagaaacccttagg-ac-actcccaag 766
Query: 121 tgggttatttctggattctccatattctatgcgtkatcacatcaaatcccctttaaaaaa 180
||||| ||||| |||||||||| ||||||||||| |||||||||||||||||| ||||||
Sbjct: 767 tgggt-atttc-ggattctcca-attctatgcgtgatcacatcaaatcccctt-aaaaaa 822
Query: 181 aaaaaatggtaacttctytctagaataccagtkagaacagaccagccgyctcgayggcgg 240
||||||||| ||||||| || |||| |||||| ||||||||||||||| ||||| |||||
Sbjct: 823 aaaaaatgg-aacttctctc-agaacaccagtgagaacagaccagccgcctcgacggcgg 880
Query: 241 ctagtcgtttggaaaaattacacaatcctctgtaccggttatcgccaggcttgttctgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 ctagtcgtttggaaaaattacacaatcctctgtaccggttatcgccaggcttgttctgat 940
Query: 301 gtcccacttaatacttagcttattcagccgtttcaactccggccttatctatgaaccctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 gtcccacttaatacttagcttattcagccgtttcaactccggccttatctatgaaccctt 1000
Query: 361 catcyttkacatctgacatctgatatctgayatcyaatggtaccaggacaatggttgata 420
|||| || ||||||||||||||| |||||| ||| |||||||||||||||||||| ||||
Sbjct: 1001 catccttgacatctgacatctgacatctgacatccaatggtaccaggacaatggt-gata 1059
Query: 421 cttttctcttcgtttccaaattcgacgtttctcccgcattttctcagccgtggyacctac 480
||||||||||||||||||||| ||||||| | |||||||||||||||||||| ||| ||
Sbjct: 1060 cttttctcttcgtttccaaat-cgacgttcc--ccgcattttctcagccgtggcacc-ac 1115
Query: 481 catcgcaatctctatctttatttttgtacagccggtccgctattctatttayaatttacg 540
|| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1116 ca-cgcaatctc-atctttatttttgtacagccggtccgctattctatttacaatttacg 1173
Query: 541 tgtgagcttccaaaagtgccagctaagtggtactttgttagttatttttttgttagtagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 tgtgagcttccaaaagtgccagctaagtggtactttgttagttatttttttgttagtagt 1233
Query: 601 aagttatttttttcgtctgattaaggtagaacagaycgatatataagcatagaaaagtaa 660
||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 1234 aagttatttttttcgtctgattaaggtagaacagaccgata-ataagca-agaaaagtaa 1291
Query: 661 actgaggagaagtgagataaagagcctatgcagtttgtttcacaaactgtcctttttttc 720
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1292 actgaggagaagtgagacaaagagcctatgcagtttgtttcacaaactgtcctttttttc 1351
Query: 721 cggggtccactccactctgccagtttcaacaactttaatcattcatttcggtctacctct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1352 cggggtccactccactctgccagtttcaacaactttaatcattcatttcggtctacctct 1411
Query: 781 aaattttgagaggttacaatgttacgaaatagttatgttgattattttgttgatgatgat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 aaattttgagaggttacaatgttacgaaatagttatgttgattattttgttgatgatgat 1471
Query: 841 gatgttgctaatatttggacgcgacctttggagawtacagcaaccag 887
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1472 gatgttgctaatatttggacgcgacctttggagaatacagcaaccag 1518
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,187
Number of Sequences: 1807
Number of extensions: 12187
Number of successful extensions: 427
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)